CDS

Accession Number TCMCG051C51248
gbkey CDS
Protein Id XP_024449031.1
Location complement(join(<24258..25422,25608..26012,26244..26550,26767..27514,27725..28862))
Gene LOC112326039
GeneID 112326039
Organism Populus trichocarpa

Protein

Length 1254aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024593263.1
Definition uncharacterized protein LOC112326039, partial [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category H
Description transposition, RNA-mediated
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
KEGG_ko ko:K09250        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGATAATGTGGTACCACTGGTGCGACTAGTCAAGAGTATGAGGGAAATGGGCTGTGAACCGTATATGGGGGAACAAGATGCAGAGATAGCTGGAAGATGGATCAGGAAGGTAGAAAAGACAATGATTCAAATAAGCATACCCGAGGGTTTGAGGGTAAATTGTGCATCCCAGTTACTATCTGATAGGGCCATGACATGGTGGGAAACAGTTCAGCTGAGGCGTGCGACTGAGACCCTAACTTGGAGTGATTTCAAGACAGAGTTTGAGAATCAGTTTTATTCCAAGTATCATCGCAAGGTGAAAGAACAAGAGTTCTTAGCATTAAGACAGGGTGATATGTCAGTATTGGAGTACGAAAGGAGATTCCATGACCTCTCATTGTTCGCCCCACATTATGTGCCGACAGAGGAACATATGATTGAAAAGTTGAGAGATGGTTTACGACAGTATTTGAGACAAGGATTGATCGCCTTGCGATTTAAATCGGTGAGGGAGTTGATTGAGGCTGCACAAGCTCTGGAGGCATGTATTGGAGAAAGCCAAGGGGGGTATCAGAGTATAAGCAAAAAGAGAGATGGGGACTATTTCAGCGGCAGACCACCGCACCCGAAGAAAGGAAAAAGTGGAGTGTTTGAGCAGCACGGAAAGAAGGGGAGTTTGATATTACCGCCTCACCAACAGTCAAGTGGGAGAATGATGGCGGGACAGTCGCACTCGAGGGCAAACTCTTCAACTGGGACCGGTGACCGCAGGGGAGTTGACTATCCTTTTTGTGTAAAATATGGACAAAAACACCCTGGGGACTGCTCAGTTTCCCCTGGGCGATGCTTTGTGTGCAGAGGAGAGGGTCATAGGTGGAGGAACTGCCAGTATCTTAGCCAAGGGTGTCATTACTGTGGTGGGAAAGGTCATTACAAGAGGGACTGCCCCAAAAGAAACACCGGACAAGTAAAGAGCTATAGACAGCCCAGTCAGAGCCACCAGCAGTCAGTCACCGTTAATAGGCCAGTGAGATCTTCTCAATCAGGGGCAAACTCCAGTCGAGGGAAGCCGAGGGCACAAAATGATCGGACCCAAGGGAGGGTCTTCCACCTGACACAGGAGGAGGCCAGGGCTGCATCGGATGTGGTGGCAGAAGTAGACTTGATTCCCTTAGAGCTGCATGATTTTGACATAATACTAGGCATGGATTGGTTGAGTAAATACAAGGCACTAATAGATTGTTATGCTAAAACTGTTACCTTTCAAACACCTAAGGGCGAGAAAATGACTTTTGAAGGAGAGAGATTTCCCAAACTGAATGCTTTAATATCGGTGGTAACAGCCCAAAAATTTTTAAGAAAGGGATGTATGGGATACCTCGCATACATCTTAAACTCTGATGATGAAGGTCCACGATTGAAGGATATTCCTGTGGTGAAGGATTTCCCAGATGTGTTTCCAGAAGAACTACCAGGACTACCCCCGGAGCGAGAGGTAGAGGTGTCTATAGACACTTTTCCTGGAGTCCCACCCATAGCCCAACAACCATATCGGATGGCTCCAGCAGAACTGAACGAGTTAAAGACTCAATTACAGGAATTATTAGACAAGGGGTTCATACGGCCCAGTAATTCTCCTTGGGGAGCACCGGTCCTATTTGTAAGAATGAAAGATGGAACCCATAGGCTTTGTATTGACTATCGACAGTTGAACAAAATACCAATGAAAAACAAGTATCGTTTACCTCGGATAGATGATTTGTTCGACCAATTAAAGGGAGCGAGGGCATTTTCGAAGATAGATCTGAGATCAGGGTACTATCAGATGAAGATTAAAGAAGCGGATGTAGCAAAGACCGCATTTAGAACTCGTTACGGACACTATGAATTTTTGGTGTTACCAGTGATGTTTTTGGGACATGTCATTTCAGCCGAAGGTGTTTTTGTCGACCCTCAAAAAGTCGAAGCAGTCTTGAAATGGGAAAGACCGACTTCGGTCACTGAAATACGTAGTTTCCTGGGACTTGCAGGATACTATCGGAGATTTATCGAAGGTTTTTCCCTGATTGCAACCCCTTTGACCCAACTAACTAGGAAGGATAAGAAGTGGGTGTGGTCGGAAGAATGTGAGGCAAGCTTCCAAGAATTGAAGAGGAGGCTCACCACTGCTCCAGTCTTAACTCTCCCCTCAGGGACCGAGGGTTTTGTGGAGTTGAACATGCGGCAAAGAAGGTGGATAGAGCTCATTAAGGATTATGATTGCACCATAGAATACCACCCGGGGAAAGCAAATGTGGTGGCAGATGCCCTCAGTCGCAAAAATAAAGCCTCCTTGGGAAGCTTAACAGTGGGAAAGGAGCGGCAATTGGCAGAATTAAAAGAGTTGGGTGCAGATTTGGGAATTGATGCAAGAGGTGGGTTAGTAGCCCAATTATTGGTGCGACCAACGTATCGAGAACAGATACTACATGCCCAATTCCATGACAAGGTGGGATCCAAGATTAGGAAGAATGTGGAGGCCGGGGTAGAAATGAAATTCCGAGTAGCGGATGATGGATCCTTGATGATGGGACAACGGTTGTACGTGCCTGATGACGAAACAATCAAACGTATGGGAATAGCTGAGTATGTGTCAAAGTGTGGGATATGTCAACAAGTCAAGGTTGAACACCAAAGGCCTGCGGGACCATTACAGCCATTACAAATTCCAGAATGGAAGTGGGAGATGATCACCATGGATTTCGTGTCGGGATTTCCCAAGGGGAGAAAAGGAAATGATGCAATATGGGTCATTGTGGATCGGTTGACGAAATCCGCACTATTCTTGCCTGTAAAGATGACCGACTCGGTGGACAAGCTTGCCAAGATCTACATAAATGAGGTGGTACGACTTCATGGGATTCCGGTGTCCATTGTATCGGATCGAGATCCTAGGTTCACCTCTCGACTTTGGCCGAGCATACAACATGCCTTGGGGACAAGATTGGACATGAGCACTGCGTTTCACCCTCAAACGGATGGCCAATCGGAAAGAGTCATTCAAGTCTTGGAAGACCTATTACGGGCATGTGTGCTAGAATTTGGAGGAAACTGGGAGGAACACATGGCATTGGTGGAGTTCACGTATAACAATAGTCACCAAGCCACAATAGGGATGGCCCCATATGAAGCCTTGTATGGTAGGAGGTGTAGAACTCCTTTATGTTGGGAGGAAATTGGGGACCGGAAGTTATATGGCGCAGAGTTAGTTCAAGTCACCACGGAGAAAGTGAGAATTATCAGGGATCGCATCAAAGCCGCACAGGATAGACAGAAGAAGTATGCCGATGTGAGGAGAAGACCTCTCGAGTTCAGTACGGGGGACCAGGTGTTCCTGAAGGTAGCCCCATGGAAGAACATGTTACGATTTGGATTGAAAGGAAAGTTAACTCCCCGTTTTATTGGACCCTTCAAAATCTTACAACGAGTTGGACCAGTAGCCTACAAGGTGGATTTGCCCCCACAGTTAGCCAGGGTCCATGATGTGTTCCATGTCTCCTTGTTAAGGAAGGCTAACGTCGACCCCGCCCGAGTTCTACCCCGGGTCCCAGTAGAGGTCAAGGAAGACTTAACACTGGAATTGAGGCCCATAAGGATACTAGATCAAGAAGTGAAGGAGTTACGGAGCAAAAAGATCCCCATCGTTAGAATCTTATGGCGAAATGCTCAAGTAGAAGAGGAAACTTGGGAGAGGGAGGCTGAGATGAGAAAAAAGTACCCCAATTTATTTGATCTACCAG
Protein:  
MDNVVPLVRLVKSMREMGCEPYMGEQDAEIAGRWIRKVEKTMIQISIPEGLRVNCASQLLSDRAMTWWETVQLRRATETLTWSDFKTEFENQFYSKYHRKVKEQEFLALRQGDMSVLEYERRFHDLSLFAPHYVPTEEHMIEKLRDGLRQYLRQGLIALRFKSVRELIEAAQALEACIGESQGGYQSISKKRDGDYFSGRPPHPKKGKSGVFEQHGKKGSLILPPHQQSSGRMMAGQSHSRANSSTGTGDRRGVDYPFCVKYGQKHPGDCSVSPGRCFVCRGEGHRWRNCQYLSQGCHYCGGKGHYKRDCPKRNTGQVKSYRQPSQSHQQSVTVNRPVRSSQSGANSSRGKPRAQNDRTQGRVFHLTQEEARAASDVVAEVDLIPLELHDFDIILGMDWLSKYKALIDCYAKTVTFQTPKGEKMTFEGERFPKLNALISVVTAQKFLRKGCMGYLAYILNSDDEGPRLKDIPVVKDFPDVFPEELPGLPPEREVEVSIDTFPGVPPIAQQPYRMAPAELNELKTQLQELLDKGFIRPSNSPWGAPVLFVRMKDGTHRLCIDYRQLNKIPMKNKYRLPRIDDLFDQLKGARAFSKIDLRSGYYQMKIKEADVAKTAFRTRYGHYEFLVLPVMFLGHVISAEGVFVDPQKVEAVLKWERPTSVTEIRSFLGLAGYYRRFIEGFSLIATPLTQLTRKDKKWVWSEECEASFQELKRRLTTAPVLTLPSGTEGFVELNMRQRRWIELIKDYDCTIEYHPGKANVVADALSRKNKASLGSLTVGKERQLAELKELGADLGIDARGGLVAQLLVRPTYREQILHAQFHDKVGSKIRKNVEAGVEMKFRVADDGSLMMGQRLYVPDDETIKRMGIAEYVSKCGICQQVKVEHQRPAGPLQPLQIPEWKWEMITMDFVSGFPKGRKGNDAIWVIVDRLTKSALFLPVKMTDSVDKLAKIYINEVVRLHGIPVSIVSDRDPRFTSRLWPSIQHALGTRLDMSTAFHPQTDGQSERVIQVLEDLLRACVLEFGGNWEEHMALVEFTYNNSHQATIGMAPYEALYGRRCRTPLCWEEIGDRKLYGAELVQVTTEKVRIIRDRIKAAQDRQKKYADVRRRPLEFSTGDQVFLKVAPWKNMLRFGLKGKLTPRFIGPFKILQRVGPVAYKVDLPPQLARVHDVFHVSLLRKANVDPARVLPRVPVEVKEDLTLELRPIRILDQEVKELRSKKIPIVRILWRNAQVEEETWEREAEMRKKYPNLFDLP